Protein ZmHB4
ZmHB4 is a protein in the Homeobox family.
Information
TF Name: ZmHB4
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB4
Uniprot ID: K7VB56
Subgenome: 1

Protein ZmHB4

ZmHB4 is a protein in the Homeobox family.

Overview of domains present in v5 transcripts
PF00046PF02183
Zm00001eb377500_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d045400DAPseq no logo sequence fimo position
Zm00001d045400DAPseq no logo sequence fimo position
Zm00001d045400ChIPseq no logo sequence fimo position
Zm00001d045400PChIPseq no logo sequence fimo position

Interactions where ZmHB4 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB4 is the target  
Expand


There are 60 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb377500_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00046
PF02183
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

TGATTACATAATACTCCGGCGATGG...

GRMZM2G106276_T01 from maize genome v3


Related TFome: pUT6272

Amino Acid Sequence
Copy to clipboard

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

Nucleotide Sequence
Copy to clipboard
     
Expand

CACGAGCGCCCAGCTCATCATTGTC...

Zm00001d045400_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAPQSLDLGLSLGLGVAAFQPSSFCHPGNAVVVPAAAEREASPAAAEERERRCSPAGSPVSSGSGSGNKRGAAERSAGAG
AGSGDEDDDGAARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALASSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
WCEQLAEENRRLGKEVAELRALSAAPAAPLTTLTMCLSCRRVASSSPPSSSSSPNIPGAAAASGGSMASPAAAAATLPAH
RQFFCGFRDAGAAAAAYGTASSGLAKPVRAAR

Nucleotide Sequence
Copy to clipboard
     
Expand

ACCAACTCCGGCGGCCGGTGCAGCA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26